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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Russian Journal of Genetics</journal-id><journal-title-group><journal-title xml:lang="en">Russian Journal of Genetics</journal-title><trans-title-group xml:lang="ru"><trans-title>Генетика</trans-title></trans-title-group></journal-title-group><issn publication-format="print">0016-6758</issn><issn publication-format="electronic">3034-5103</issn><publisher><publisher-name xml:lang="en">The Russian Academy of Sciences</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">676592</article-id><article-id pub-id-type="doi">10.31857/S0016675824120035</article-id><article-id pub-id-type="edn">waumsd</article-id><article-categories><subj-group subj-group-type="toc-heading"><subject>ГЕНЕТИКА МИКРООРГАНИЗМОВ</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">The Reparative dna Polymerase eta (Polη) Plays a key Role in Mutagenesis at Low Doses of uv Radiation in Yeast <italic>Saccharomyces cerevisiae</italic></article-title><trans-title-group xml:lang="ru"><trans-title>Репаративная ДНК-полимераза eta (Polη) играет ключевую роль в мутагенезе при низких дозах УФ-облучения у дрожжей <italic>Saccharomyces cerevisiae</italic></trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Alekseeva</surname><given-names>E. A.</given-names></name><name xml:lang="ru"><surname>Алексеева</surname><given-names>Е. А.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alekseeva_ea@pnpi.nrcki.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Evstyukhina</surname><given-names>T. A.</given-names></name><name xml:lang="ru"><surname>Евстюхина</surname><given-names>Т. А.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alekseeva_ea@pnpi.nrcki.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Skobeleva</surname><given-names>I. I.</given-names></name><name xml:lang="ru"><surname>Скобелева</surname><given-names>И. И.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alekseeva_ea@pnpi.nrcki.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Peshekhonov</surname><given-names>V. T.</given-names></name><name xml:lang="ru"><surname>Пешехонов</surname><given-names>В. Т.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alekseeva_ea@pnpi.nrcki.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Korolev</surname><given-names>V. G.</given-names></name><name xml:lang="ru"><surname>Королев</surname><given-names>В. Г.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><email>alekseeva_ea@pnpi.nrcki.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Konstantinov Petersburg Nuclear Physics Institute of the National Research Centre “Kurchatov Institute”</institution></aff><aff><institution xml:lang="ru">Петербургский институт ядерной физики им. Б.П. Константинова Национального исследовательского центра “Курчатовский институт”</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">Kurchatov Genome Center — Petersburg Nuclear Physics Institute</institution></aff><aff><institution xml:lang="ru">Курчатовский геномный центр – ПИЯФ</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2024-12-15" publication-format="electronic"><day>15</day><month>12</month><year>2024</year></pub-date><volume>60</volume><issue>12</issue><fpage>25</fpage><lpage>35</lpage><history><date date-type="received" iso-8601-date="2025-03-03"><day>03</day><month>03</month><year>2025</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2024, Russian Academy of Sciences</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2024, Российская академия наук</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="en">Russian Academy of Sciences</copyright-holder><copyright-holder xml:lang="ru">Российская академия наук</copyright-holder></permissions><self-uri xlink:href="https://transsyst.ru/0016-6758/article/view/676592">https://transsyst.ru/0016-6758/article/view/676592</self-uri><abstract xml:lang="en"><p>Under normal conditions and when exposed to low doses of mutagens, DNA damage tolerance systems (DDT) are a key way to combat DNA damage in bacterial and eukaryotic cells. Two different DDT pathways, erroneous (translesion synthesis – TLS) and error-free (recombination), operate in all eukaryotic organisms. TLS involves the protein complex polymerase zeta (Polζ) (encoded by the genes <italic>REV</italic><italic>1, </italic><italic>REV</italic><italic>3</italic> and <italic>REV</italic><italic>7</italic>), and polymerase eta (Polη) (encoded by the <italic>RAD</italic><italic>30</italic> gene); these polymerases are conserved from yeast to humans. We have shown that at low levels of UV radiation doses, a decisive role in mutagenesis is played by the high activity of Poly, which bypasses the overwhelming number of DNA damage that got in the way of the replication machine. Both in the case of irradiation with high and low doses of UV rays, checkpoint plays an important role in induced mutagenesis. However, the roles of genes involved in the regulation of UV-induced mutagenesis at low and high doses often differ. Inactivation of the <italic>RAD</italic><italic>30</italic> gene at low doses leads to an increased level of induced mutagenesis, and at high doses it practically does not differ from the level of the wild-type strain. Deletions of the <italic>HIM</italic><italic>1, </italic><italic>HSM</italic><italic>3</italic> and <italic>HIF</italic><italic>1</italic> genes, on the contrary, reduce the high level of mutagenesis characteristic of high doses to the level of the wild-type strain at low doses. These differences characterize the local and global checkpoint.</p></abstract><trans-abstract xml:lang="ru"><p>В нормальных условиях и при воздействии малых доз мутагенов ключевым способом борьбы с повреждениями ДНК у бактериальных и эукариотических клеток является система толерантности к повреждениям ДНК (ТПД). Две различные ветви ТПД, ошибочная (translesion synthesis – TLS) и безошибочная (рекомбинационная), функционируют во всех эукариотических организмах. TLS вовлекает белковый комплекс полимеразы дзета (Polζ) (кодируемый генами <italic>REV1</italic>, <italic>REV3</italic> и <italic>REV7</italic>) и полимеразу эта (Polη) (кодируемую геном <italic>RAD30</italic>); эти полимеразы эволюционно консервативны от дрожжей до человека. Мы показали, что при низких уровнях доз УФ-излучения решающую роль в мутагенезе играет высокая активность Polη, которая обходит подавляющее число оказавшихся на пути репликативной машины повреждений ДНК. Как в случае облучения высокими, так и низкими дозами УФ-лучей большую роль в индуцированном мутагенезе играет чекпойнт. Однако функции генов, участвующих в регуляции УФ-индуцированного мутагенеза при низких и высоких дозах, часто различаются. Инактивация гена <italic>RAD30</italic> при низких дозах приводит к повышенному уровню индуцированного мутагенеза, а при высоких дозах мутагенез практически не отличается от уровня штамма дикого типа. Делеции генов <italic>HIM1, </italic><italic>HSM3 </italic>и<italic> </italic><italic>HIF1, </italic>наоборот, снижают высокий уровень мутагенеза, характерный для высоких доз, до уровня штамма дикого типа при низких дозах. Эти различия, по-видимому, характеризуют локальный и глобальный чекпойнт.</p></trans-abstract><kwd-group xml:lang="en"><kwd>Polη</kwd><kwd>S. cerevisiae</kwd><kwd>checkpoint</kwd><kwd>low doses</kwd><kwd>UV-induced mutagenesis</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>Polη</kwd><kwd>S. cerevisiae</kwd><kwd>чекпойнт</kwd><kwd>низкие дозы</kwd><kwd>УФ-индуцированный мутагенез</kwd></kwd-group><funding-group><award-group><funding-source><institution-wrap><institution xml:lang="ru">Российский научный фонд (грант)</institution></institution-wrap><institution-wrap><institution xml:lang="en">Russian Science Foundation (grant)</institution></institution-wrap></funding-source><award-id>23-24-00119</award-id></award-group></funding-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Lazzaro F., Giannattasio M., Puddu F. et al. Checkpoint mechanisms at the intersection between DNA damage and repair // DNA Repair. 2009. V. 8. P. 1055–1067. doi: 10.1016/j.dnarep.2009.04.022</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Prakash L. Characterization of postreplication repair in Saccharomyces cerevisiae and effects of rad6, rad18, rev3 and rad52 mutations // Mol. Gen. Genet. 1981. V. 184. P. 471–478. doi: 10.1007/BF00352525</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Baynton K., Bresson-Roy A., Fuchs R.P.P. Analysis of damage tolerance pathways in Saccharomyces cerevisiae: A requirement for Rev3 DNA polymerase in translesion synthesis // Mol. Cell. Biol. 1998. V. 18. P. 960–966. doi: 10.1128/MCB.18.2.960</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>Hishida T., Kubota Y., Carr A.M., Iwasaki H. RAD6–RAD18–RAD5-pathway-dependent tolerance to chronic low-dose ultraviolet light // Nature. 2009. V. 457. P. 612–615. doi: 10.1038/nature07580</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Huang D., Piening B.D., Paulovich A.G. The preference for error-free postreplication repair in Saccharomyces cerevisiae exposed to low-dose methyl methanesulfonate is cell cycle dependent // Mol. Cell. Biol. 2013. V. 33. P. 1515–1527. doi: 10.1128/MCB01392-12</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Zhang H., Lawrence C.W. The error-free component of the RAD6/RAD18 DNA damage tolerance pathway of budding yeast employs sister-strand recombination // Proc. Natl Acad. Sci. USA. 2005. V. 102. P. 15954–15959. doi: 10.1073/pnas.0504586102</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Forey R., Poveda A., Sharma S. et al. Mec1 is activated at the onset of normal S phase by low-dNTP pools impending DNA replication // Mol. Cell. 2020. V. 78. P. 396–410. doi: 10.1016/molcel.2020.02.021</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Tercero J.A., Longhese M.P., Diffley J.F. A central role for DNA replication forks in checkpoint activation and response // Mol. Cell. 2003. V. 11. P. 1323–1336. doi: 10.1016/s1097-2765(03)00169-2</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Захаров И.А., Кожин С.А., Кожина Т.А. и др. Сборник методик по генетике дрожжей-сахаромицетов. Л.: Наука, 1984, изд. 2-е. 144 с.</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Fedorova I.V., Kovaltzova S.V., Gracheva L.M. et al. Requirement of HSM3 gene for spontaneous mutagenesis in Saccharomyces cerevisiae // Mutat. Res. 2004. V. 554. P. 65–75. doi: 10.1016/j.mrfmmm.2004.03.003</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>Evstyukhina T.A., Alekseeva E.A., Fedorov D.V. et al. Genetic analysis of the Hsm3 protein function in yeast Saccharomyces cerevisiae NuB4 complex // Genes. 2021. V. 12. doi: 10.3390/ genes12071083</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Evstyukhina T.A., Alekseeva E.A., Peshekhonov V.T. et al. The role of chromatin assembly factors in induced mutagenesis at low levels of DNA damage // Genes. 2023. V. 14. doi: 10.3390/genes14061242</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>Johnson R.E., Prakash S., Prakash L. Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, Polη // Science. 1999. V. 283. P. 1001–1004. doi: 10.1126/science.283.5404.1001</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>Prakash S., Johnson R.E., Prakash L. Eukaryotic translesion synthesis DNA polymerases: specificity of structure and function // Annu. Rev. Biochem. 2005. V. 74. P. 317–353. doi: 10.1146/annurev.biochem.74.082803.133250</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Wang Z., Xiao W. Distinct requirement for budding yeast Rev1 and Polη in translesion DNA synthesis across different types of DNA damage // Curr. Genet. 2020. V. 5. P. 1019–1028. doi: 10.1007/s00294-020-01092-w</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Kozmin S.G., Pavlov Y.I., Kunkel T.A., Sage E. Roles of Saccharomyces cerevisiae DNA polymerases Polη and Polζ in response to irradiation by simulated sunlight // Nucl. Acids Res. 2003. 2003. V. 31. P. 4541–4552. doi: 10.1093/nar/gkg489</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Sobolevska A., Halas A., Plachta M. et al. Regulation of the abudance of Y-family polymerases in the cell cycle of budding yeast in response to DNA damage // Curr. Genet. 2020. V. 66. P. 749–763. doi: 10.1007/s00294-020-01061-3</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Alekseeva E.A., Evstyukhina T.A., Peshekhonov V.T. et al. The Role of the RPD3 complex of Saccharomyces cerevisiae yeast in the activation of UV-induced expression of RNR complex genes // J. Biomed. Res. Environ. Sc. 2024. V. 5. P. 360–372. doi: 10.37871/jbres1902</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Alekseeva E.A., Evstyukhina T.A., Peshekhonov V.T., Korolev V.G. Participation of the HIM1 gene of yeast Saccharomyces cerevisiae in the error-free branch of post-replicative repair and role Polη in him1-dependent mutagenesis // Curr. Genet. 2021. V. 67. P. 141–151. doi: 10.1007/s00294-020-01115-6</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Zhao X., Chabes A., Domkin V. et al. The ribonucleotide reductase inhibitor Sml1 is a new target of the Mec1/Rad53 kinase cascade during growth and in response to DNA damage // EMBO J. 2001. V. 20. P. 3544–3553. doi: 10.1093/emboj/20.13.3544</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Chabes A., Georgieva B., Domkin V. et al. Survival of DNA damage in yeast directly depends on increased dNTP levels allowed by relaxed feedback inhibition of ribonucleotide reductase // Cell. 2003. V. 112. P. 391–401. doi: 10.1016/s0092-8674(03)00075-8</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Haracska L., Johnson R.E., Prakash L., Prakash S. Efficient and accurate replication in the presence of 7,8-dihidro-8-oxoguanine bt DNA polymerase eta // Nature genet. 2000. V. 25. P. 458–461. doi: 10.1038/78169</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Watanabe K., Tateishi S., Kawasuji M. et al. Rad18 guides poleta to replication stalling sites through physical interaction and PCNA monoubiquitination // EMBO J. 2004. V. 23. P. 3886–3896. doi: 10.1038/sj.emboj.7600383.</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Durando M., Tateishi S., Vaziri C. A non-catalytic role of DNA polymerase eta in recruiting Rad18 and promoting PCNA monoubiquitination at stalled replication forks // Nucl. Acids Res. 2013. V. 41. P. 3079–3093. doi: 10.1093/nar/gkt016</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Ripley B.M., Gildenberg M.S., Washington M.T. Control of DNA damage bypass by ubiquitylation of PCNA // Genes. 2020. V. 11. P. 138. doi.org/10.3390/genes11020138</mixed-citation></ref><ref id="B26"><label>26.</label><mixed-citation>Fedorova I.V., Gracheva L.M., Kovaltzova S.V. et al. The yeast HSM3 gene acts in one of the mismatch repair pathways // Genetics. 1998. V. 148. P. 963–973. doi: 10.1093/genetics/148.3.963</mixed-citation></ref></ref-list></back></article>
